PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19878
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 303aa    MW: 32413.8 Da    PI: 4.6702
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19878genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY80.41.9e-25111170258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               +Dg+ WrKYGqKe++++++pr Y+rCt++   gCp++++v+++++dp++ +itY g+H++
  EMT19878 111 EDGFIWRKYGQKEIHNNKHPRLYFRCTYKhdiGCPATRQVQQAEDDPSLYVITYFGDHTC 170
               8***************************99999*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-25105170IPR003657WRKY domain
SuperFamilySSF1182908.76E-24107171IPR003657WRKY domain
SMARTSM007741.4E-37110172IPR003657WRKY domain
PROSITE profilePS5081119.462111168IPR003657WRKY domain
PfamPF031061.8E-25111170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MAALVTPAGC PSVSELVVQG RDSAAVLEAL LRGASSPDNA GIRELAAEIL RCCDRALAAL  60
HGGEGAVVDV SGGRKRKSGP GGADNLTRPK RRMRASGGEK AARVERRRTA EDGFIWRKYG  120
QKEIHNNKHP RLYFRCTYKH DIGCPATRQV QQAEDDPSLY VITYFGDHTC CQGDAAGAVL  180
EAEDVKMQPF VINFGSATAS SGSPWLSSPS DTDDVRRSDS GASGSSQAVC SPEEFEVKEA  240
KVESTSEDSQ TVDPAAAELS SSADFSCASP AWDPLSGCLD WDHFGDSPFD CEFLDFDAIP  300
LFQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2852060.0KT285206.1 Triticum aestivum WRKY transcription factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003566135.12e-83PREDICTED: probable WRKY transcription factor 54
TrEMBLA0A0U2USI60.0A0A0U2USI6_WHEAT; WRKY transcription factor 1
TrEMBLR7WCZ20.0R7WCZ2_AEGTA; Putative WRKY transcription factor 70
STRINGMLOC_5971.11e-179(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46632667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-27WRKY DNA-binding protein 70